Matt,
First off, congrats on your new Vantages. I think that in time, once you upgrade your CD player and maybe some other gear (cables, power conditioning, room acoustics), you will find they are, in fact, OUTSTANDING speakers with almost ALL types of music.
It's VERY difficult (if not completely meaningless and impossible) to analyze a system through emails, without ever hearing it in person and being in the room with it. There are simply TOO many unknowable factors--window placement, carpeting, furniture type and location, construction techniques and materials of walls, floor, and ceiling, art hanging on the walls, curtains, etc., for ANYONE to make a meaningful suggestion to you as to why some music sounds good but other music sounds dicey, at least from a room-acoustics POV, or with regards to equipment. It's that simple, and as much as I respect the opinions of many of the members of this fine forum (and several folks here ARE truely genius with regards to component matching, cables, and room acoustics) the fact remains that without seeing and hearing your rig in person, and in it's "native environment", anything that anyone suggests is purely speculative guesswork, and should be taken with a few pounds of salt...
However, I am going to go out on a limb here and bring up one factor that nobody else here seems to be addressing. It is a well-known fact among music fans, recording enthusiasts, and some audiophiles that most (and I mean like 99%) of all "popular" music recordings are pure, unmitigated crap, and have had the recorded signal massively compressed, unrepentantly manipulated, and mercilessly molested to the point where they simply don't remotely resemble what the music sounds like when played by real humans on real instruments...
So if your classical and jazz recordings sound OK, but your rock and pop recordings sound thin in the highs, or edgey in the mids, you can thank the effects-obsessed production engineers and the mindless money-grubbing execs at the record companies.
It's NOT your gear. It's NOT your cables. It's NOT your amps or your speakers, or even your room. It's because some fidgety mixing board geek just got a new stereo compressor in his rack, and decided to mutilate the signal of what SHOULD have been a very clean, pure, detailed digital master recording, so that it would sound better on crappy headphones through an iPod, or through the crappy factory speakers in a car system.
He doesn't CARE that you own Vantages and a Krell amp. In fact, he probably secretly HATES people like us, because we have gear he can only dream about. Like in any business, the people who actually do the REAL work (like him) in the Music Business, get **** for pay, while the idiots in the corner offices who don't know dynamic range from a prostate exam siphon off the majority of the profits to fund therapy sessions and Botox treatments for their trophy wives...
You have a decent rig, from your description. The CD changer is a little below the level of performance of the Krell and the Vantages, and you probably SHOULD replace it with something a little more "high end". But truth be told, a better CD player is only going to make those "pop" recordings sound WORSE, not better, because it is going to REALLY reveal all the stuff that is missing (and added to) the recording.
I used to listen almost exclusively to rock. But since I've assembled a pretty decent system, I find that the only modern (digital) rock recordings I can stand to listen to are "audiophile" pressings (like MFSL gold CDs and the like). I still listen to a fair amount of rock and pop on vinyl, and some of those older pressings (even the non-audiophile pressings) sound TERRIFIC compared to their CD counterparts. These days I listen to a lot of acoustic music--classical, jazz, blues, folk--that sort of thing. Because most of those sorts of recordings are geared toward people who listen to music in their house on a stereo system, not pre-adolescents with iPods and car stereos.
So it's not so much your gear as it is the twiddling little fingers of evil that are abusing those recordings in some dank production studio.
Relax. Your rig is OK. It's the music (or more appropriately, the PRODUCTION of those recordings) that sucks...
--Richard